Complex regions of Y Chromosome that could |
generate errors into phylogenetic studies |
Region |
Coordinates |
|
|
Start |
End |
PAR1 |
1 |
2781479 |
LTR2 |
2997393 |
2998942 |
HSA |
7228670 |
7229600 |
CER3 |
7295058 |
7295821 |
CER6 |
7301890 |
7302401 |
CER7 |
7303737 |
7305018 |
CER9 |
7366890 |
7367378 |
CER12 |
7451057 |
7451485 |
CEN |
10072350 |
11686750 |
CER15 |
11930845 |
11930917 |
CER17 |
12362517 |
12363336 |
CER18 |
12363524 |
12364177 |
CER19 |
12369399 |
12369930 |
ARSDP |
12379765 |
12380130 |
VCY |
13985772 |
13986512 |
VCY |
14056218 |
14056958 |
DYZ 19 |
20054914 |
20351054 |
PPR |
26637971 |
26673210 |
PAR2 |
56887903 |
57217415 |
|
|
|
Those sections of the Y chromosome suffer from frequent recombination events and are therefore not useful for phylogenetic studies. The SNPs that falls under those positions could be false positives. |